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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790654.1_cds_XP_016502980.1_1572
CDS Infomation

[gene=LOC107821091] [db_xref=GeneID:107821091] [protein=E3 ubiquitin-protein ligase CHIP] [exception=annotated by transcript or proteomic data] [protein_id=XP_016502980.1] [location=complement(join(29352..29477,29558..29668,29759..29909,30001..>30134,<38313..38376,38454..38521,38598..38714))] [gbkey=CDS]
Sequence

ATGTCACCAATAGTGGCTCCCTCTGCGGCGGCCAAACAAGCGGAACAACTGAAGCAAGAT
GGCAATAATTACTTCCAGAAAAATCGATTTGGAGCTGCCATCGATGCCTACACCGAGGCT
ATTACATTGTGCCCTAATGTTCCCATATATTGGACCAATCGTGCTTTGTGCCATCGGAAA
CGCAATGAGTGGACCAGAGTAGAGGAAGATTGTAGGGAGGCTATTCAGCTCGATCACACT
TCTGTTAAGGCATTGGATCTTGGAAGAGGTGCTAATCCAAAGAGTTACATGGTTGAAGAG
ATCTGGCAGGAGCTTGCAAAAGCAAAATACTTGGAGTGGGAGCATGAATCTTCAAGACGC
ACATGGGAACTTAAGAAACTGAAAGAAACCTGTGAGTCAGCTCTCAAGGAGAGACATGAG
CGTGATAGCTCTCAGATAGAAGGGTTCATAGATAGATCGACATCCCTGTTGAAGCAACTG
GACGCTTTAGGCAGGGTTTTCAGGAAAGCTGCAGAAGATGATACTCCCACCGAGGTACCC
GATTACCTATGTTGCAAGATCACACTTGACATTTTTCGTGACCCTGTCATCACGCCCAAT
GGGGTTACATATGAAAGGGCAGTGATCCTTGACCATCTGGAGAAGGTGGGAAAGTTTGAC
CCGGTCACACGAGAACCCCTTAAACCATTTCAGCTGGTGCCAAATTTGGCTATAAAAGAA
GCAGTACATGCATTTCTGGATAAGCATGGCTGGGCATACAGGATGGGTTGA

Peptide Sequence

PEP ID

XP_016502980.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase CHIP [Nicotiana tabacum]
Sequence

MSPIVAPSAAAKQAEQLKQDGNNYFQKNRFGAAIDAYTEAITLCPNVPIYWTNRALCHRK
RNEWTRVEEDCREAIQLDHTSVKAHYMLGLALLQKEQYAEGVRELAKALDLGRGANPKSY
MVEEIWQELAKAKYLEWEHESSRRTWELKKLKETCESALKERHERDSSQIEGFIDRSTSL
LKQLDALGRVFRKAAEDDTPTEVPDYLCCKITLDIFRDPVITPNGVTYERAVILDHLEKV
GKFDPVTREPLKPFQLVPNLAIKEAVHAFLDKHGWAYRMG

Transcript Sequence

Gene sequence data has not been registered.